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Additional Quantitative Trait Loci and Candidate Genes for Seed Isoflavone Content in Soybean

Author

Listed:
  • M. Akond
  • Bazelle Richard
  • Bobby Ragin
  • Harmin Herrera
  • Umerah Kaodi
  • Cevdet Akbay
  • Stella Kantartzi
  • Victor Njiti
  • Abdelali Barakat
  • Khalid Meksem
  • David Lightfoot
  • My Kassem

Abstract

Seed isoflavone content of soybean (Glycine max L. Merr.) is a trait of moderate heritablity and an ideal target for marker selection. To date over 20 QTL have been identified underlying this trait among seven populations. The objectives of this study were to identify additional QTL and candidate genes controlling isoflavone content in a set of recombinant inbred line (RIL) populations of soybean grown in two different seasons. Variations of isoflavones namely daidzein, glycitein and genistein contents over two growing seasons and locations suggests that isoflavones are influenced by both genes and environments. Six QTL were identified on five different chromosomes (Chr) or linkage groups (LG) that controlled daidzein (Chr_2/LG-M; Chr_17a/LG-D2), glycitein (Chr_2/LG-D1b; Chr_8/LG-A2) and genistein (Chr_8/LG-A2; Chr_12/LG-H) respectively in the seeds grown in season 2010. Two QTL were identified for daidzein (Chr_6/LG-C2; Chr_13b/LG-F), two QTLs for glycitein (Chr_1/LG-D1a; Chr_17c/LG-D2) and five QTLs for genistein (Chr_3/ LG-N; Chr_8/LG-A2; Chr_9/LG-K; Chr_18/LG-G) in the seeds of the 2011 growing season. Genes located within QTL confidence intervals were retrieved and gene ontology (GO) terms were used to identify those related to the flavonoid biosynthesis process. Twenty six candidate genes were identified that may be involved in isoflavones accumulation in soybean seeds.

Suggested Citation

  • M. Akond & Bazelle Richard & Bobby Ragin & Harmin Herrera & Umerah Kaodi & Cevdet Akbay & Stella Kantartzi & Victor Njiti & Abdelali Barakat & Khalid Meksem & David Lightfoot & My Kassem, 2013. "Additional Quantitative Trait Loci and Candidate Genes for Seed Isoflavone Content in Soybean," Journal of Agricultural Science, Canadian Center of Science and Education, vol. 5(11), pages 1-20, October.
  • Handle: RePEc:ibn:jasjnl:v:5:y:2013:i:11:p:20
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    References listed on IDEAS

    as
    1. ASM G. Masum Akond & Bobby Ragin & Richard Bazzelle & Stella K. Kantartzi & Khalid Meksem & My Abdelmajid Kassem, 2012. "Quantitative Trait Loci Associated with Moisture, Protein, and Oil Content in Soybean [Glycine max (L.) Merr.]," Journal of Agricultural Science, Canadian Center of Science and Education, vol. 4(11), pages 1-16, October.
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      JEL classification:

      • R00 - Urban, Rural, Regional, Real Estate, and Transportation Economics - - General - - - General
      • Z0 - Other Special Topics - - General

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