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Estimating and Calibrating Markov Chain Sample Error Variance

Author

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  • Yann Vestring
  • Javad Tavakoli

Abstract

Markov chain Monte Carlo (MCMC) methods are a powerful and versatile tool with applications spanning a wide spectrum of fields, including Bayesian inference, computational biology, and physics. One of the key challenges in applying MCMC algorithms is to deal with estimation error. The main result in this article is a closed form, non-asymptotic solution for the sample error variance of a single MCMC estimate. Importantly, this result assumes that the state-space is finite and discrete. We demonstrate with examples how this result can help estimate and calibrate MCMC estimation error variance in the more general case, when the state-space is continuous and/or unbounded.

Suggested Citation

  • Yann Vestring & Javad Tavakoli, 2025. "Estimating and Calibrating Markov Chain Sample Error Variance," International Journal of Statistics and Probability, Canadian Center of Science and Education, vol. 13(1), pages 1-10, January.
  • Handle: RePEc:ibn:ijspjl:v:13:y:2025:i:1:p:10
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    JEL classification:

    • R00 - Urban, Rural, Regional, Real Estate, and Transportation Economics - - General - - - General
    • Z0 - Other Special Topics - - General

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