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A general modeling framework for open wildlife populations based on the Polya tree prior

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  • Alex Diana
  • Eleni Matechou
  • Jim Griffin
  • Todd Arnold
  • Simone Tenan
  • Stefano Volponi

Abstract

Wildlife monitoring for open populations can be performed using a number of different survey methods. Each survey method gives rise to a type of data and, in the last five decades, a large number of associated statistical models have been developed for analyzing these data. Although these models have been parameterized and fitted using different approaches, they have all been designed to either model the pattern with which individuals enter and/or exit the population, or to estimate the population size by accounting for the corresponding observation process, or both. However, existing approaches rely on a predefined model structure and complexity, either by assuming that parameters linked to the entry and exit pattern (EEP) are specific to sampling occasions, or by employing parametric curves to describe the EEP. Instead, we propose a novel Bayesian nonparametric framework for modeling EEPs based on the Polya tree (PT) prior for densities. Our Bayesian nonparametric approach avoids overfitting when inferring EEPs, while simultaneously allowing more flexibility than is possible using parametric curves. Finally, we introduce the replicate PT prior for defining classes of models for these data allowing us to impose constraints on the EEPs, when required. We demonstrate our new approach using capture–recapture, count, and ring‐recovery data for two different case studies.

Suggested Citation

  • Alex Diana & Eleni Matechou & Jim Griffin & Todd Arnold & Simone Tenan & Stefano Volponi, 2023. "A general modeling framework for open wildlife populations based on the Polya tree prior," Biometrics, The International Biometric Society, vol. 79(3), pages 2171-2183, September.
  • Handle: RePEc:bla:biomet:v:79:y:2023:i:3:p:2171-2183
    DOI: 10.1111/biom.13756
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    References listed on IDEAS

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    1. Nicholas G. Polson & James G. Scott & Jesse Windle, 2013. "Bayesian Inference for Logistic Models Using Pólya--Gamma Latent Variables," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 108(504), pages 1339-1349, December.
    2. Jonathan Christensen & Li Ma, 2020. "A Bayesian hierarchical model for related densities by using Pólya trees," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 82(1), pages 127-153, February.
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