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Multidimensional adaptive P‐splines with application to neurons' activity studies

Author

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  • María Xosé Rodríguez‐Álvarez
  • María Durbán
  • Paul H.C. Eilers
  • Dae‐Jin Lee
  • Francisco Gonzalez

Abstract

The receptive field (RF) of a visual neuron is the region of the space that elicits neuronal responses. It can be mapped using different techniques that allow inferring its spatial and temporal properties. Raw RF maps (RFmaps) are usually noisy, making it difficult to obtain and study important features of the RF. A possible solution is to smooth them using P‐splines. Yet, raw RFmaps are characterized by sharp transitions in both space and time. Their analysis thus asks for spatiotemporal adaptive P‐spline models, where smoothness can be locally adapted to the data. However, the literature lacks proposals for adaptive P‐splines in more than two dimensions. Furthermore, the extra flexibility afforded by adaptive P‐spline models is obtained at the cost of a high computational burden, especially in a multidimensional setting. To fill these gaps, this work presents a novel anisotropic locally adaptive P‐spline model in two (e.g., space) and three (space and time) dimensions. Estimation is based on the recently proposed SOP (Separation of Overlapping Precision matrices) method, which provides the speed we look for. Besides the spatiotemporal analysis of the neuronal activity data that motivated this work, the practical performance of the proposal is evaluated through simulations, and comparisons with alternative methods are reported.

Suggested Citation

  • María Xosé Rodríguez‐Álvarez & María Durbán & Paul H.C. Eilers & Dae‐Jin Lee & Francisco Gonzalez, 2023. "Multidimensional adaptive P‐splines with application to neurons' activity studies," Biometrics, The International Biometric Society, vol. 79(3), pages 1972-1985, September.
  • Handle: RePEc:bla:biomet:v:79:y:2023:i:3:p:1972-1985
    DOI: 10.1111/biom.13755
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    References listed on IDEAS

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    1. I. D. Currie & M. Durban & P. H. C. Eilers, 2006. "Generalized linear array models with applications to multidimensional smoothing," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 68(2), pages 259-280, April.
    2. M. C. Donohue & R. Overholser & R. Xu & F. Vaida, 2011. "Conditional Akaike information under generalized linear and proportional hazards mixed models," Biometrika, Biometrika Trust, vol. 98(3), pages 685-700.
    3. Jang, Dongik & Oh, Hee-Seok, 2011. "Enhancement of spatially adaptive smoothing splines via parameterization of smoothing parameters," Computational Statistics & Data Analysis, Elsevier, vol. 55(2), pages 1029-1040, February.
    4. Eilers, Paul H.C. & Currie, Iain D. & Durban, Maria, 2006. "Fast and compact smoothing on large multidimensional grids," Computational Statistics & Data Analysis, Elsevier, vol. 50(1), pages 61-76, January.
    5. Philip T. Reiss & Lei Huang & Pei‐Shien Wu & Huaihou Chen & Stan Colcombe, 2017. "Pointwise influence matrices for functional‐response regression," Biometrics, The International Biometric Society, vol. 73(4), pages 1092-1101, December.
    6. Tatyana Krivobokova, 2013. "Smoothing parameter selection in two frameworks for penalized splines," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 75(4), pages 725-741, September.
    7. M. P. Wand, 2003. "Smoothing and mixed models," Computational Statistics, Springer, vol. 18(2), pages 223-249, July.
    8. Krivobokova, Tatyana & Kauermann, Goran, 2007. "A Note on Penalized Spline Smoothing With Correlated Errors," Journal of the American Statistical Association, American Statistical Association, vol. 102, pages 1328-1337, December.
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